Plz first take backup of your project. Then follow these steps.
Go to the project (if multiple projects) Which have EF context class. Delete the [Migration] folder.
Then go in Nuget Package Manager Console.
And in dropdown select the project (if multiple projects). And then run following commands to get things OK for EF.
Enable-Migrations
This will generate again the migration folder
Then again fire command in Nuget Con...
Add-Migration 'with any message'
This will push things if any pending changes there
then again fire last command
Update-Database
Now ur Ef is OK back again